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README.txt (2.33 kB)

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A2.A2ref.alignment.maf.gz (820.91 MB)

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A2.D5ref_alignment.maf.gz (579.66 MB)

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AD2.At.A2ref.alignment.maf.gz (749.2 MB)

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AD2.At.D5ref_alignment.maf.gz (520.43 MB)

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AD2.Dt.A2ref.alignment.maf.gz (571.55 MB)

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AD2.Dt.D5ref_alignment.maf.gz (411.16 MB)

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AD3.At.A2ref.alignment.maf.gz (757.82 MB)

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AD3.At.D5ref_alignment.maf.gz (526.47 MB)

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AD3.Dt.A2ref.alignment.maf.gz (568.16 MB)

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AD3.Dt.D5ref_alignment.maf.gz (412.99 MB)

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AD4.At.A2ref.alignment.maf.gz (774.07 MB)

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AD4.At.D5ref_alignment.maf.gz (546.62 MB)

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AD4.Dt.A2ref.alignment.maf.gz (578.33 MB)

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AD4.Dt.D5ref_alignment.maf.gz (419.83 MB)

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AD5.At.A2ref.alignment.maf.gz (755.5 MB)

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AD5.At.D5ref_alignment.maf.gz (525.21 MB)

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AD5.Dt.A2ref.alignment.maf.gz (572.49 MB)

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AD5.Dt.D5ref_alignment.maf.gz (413.02 MB)

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AD6.At.A2ref.alignment.maf.gz (779.37 MB)

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Whole genome alignments for "Little Evidence for Homoeologous Gene Conversion and Homoeologous Exchange Events in Gossypium Allopolyploids"

dataset

posted on 2024-03-13, 20:35 authored by Justin ConoverJustin Conover

Whole genome alignments used in "Little Evidence for Homoeologous Gene Conversion and Homoeologous Exchange Events in Gossypium Allopolyploids" by Conover et al. Alignments were generated via Anchorwave.

Whole Genome Alignments, aligned to either the G. raimondii (D5ref) reference genome or the G. arboreum (A2ref) genome. Species are listed by their letter/number codes and subgenome assignments (for example, an alignment between the G. raimondii diploid reference genome and the At subgenome of G. barbdense is represented by AD2.At.D5ref_alignment.maf).

For inquiries regarding the contents of this dataset, please contact the Corresponding Author listed in the README.txt file. Administrative inquiries (e.g., removal requests, trouble downloading, etc.) can be directed to data-management@arizona.edu